Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter atp-binding protein | ALO41_02516 | P21629 | Negative | 5105499 - 5106302 | 29343.7 |
| acyl-coa dehydrogenase | ALO41_100405 | Not Available | Positive | 5107578 - 5108918 | 48961.8 |
| ribose abc transporter permease | ALO41_02517 | P36948 | Negative | 5109911 - 5110915 | 34193.4 |
| ribose abc transport system, atp-binding protein | ALO41_100132 | Q88J90 | Negative | 5110902 - 5112413 | 54471.7 |
| ribose abc transporter periplasmic ribose-binding protein | ALO41_05138 | Not Available | Negative | 5112471 - 5113475 | 35949.4 |
| methyl-accepting chemotaxis protein | ALO41_05139 | Not Available | Negative | 5113692 - 5115392 | 60688.2 |
| virk protein | ALO41_02520 | P55686 | Positive | 5115528 - 5115959 | 15089.9 |
| ispsy19, transposase | ALO41_00049 | Not Available | Negative | 5116261 - 5117364 | 41653.4 |
| hamp domain protein | ALO41_00267 | Not Available | Negative | 5117811 - 5119349 | 56481.9 |
| uncharacterized protein | ALO41_04621 | Q9HUK7 | Negative | 5120739 - 5122613 | 69859.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








