Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type vi secretion system effector, hcp1 family | ALO41_100296 | Not Available | Negative | 5063972 - 5064487 | 18593.1 |
| hypothetical protein | ALO41_03043 | Not Available | Positive | 5065390 - 5065824 | 15802.3 |
| dna-directed dna polymerase | ALO41_03044 | P18642 | Positive | 5065811 - 5066056 | 9293.28 |
| uncharacterized protein | ALO41_02307 | Not Available | Positive | 5066219 - 5066470 | 8267.07 |
| helicase domain protein | ALO41_02308 | O27830 | Positive | 5066658 - 5069150 | 92080.9 |
| uncharacterized protein | ALO41_02309 | Not Available | Positive | 5069147 - 5069803 | 23958.8 |
| deoxycytidine triphosphate deaminase | ALO41_02310 | Q48LT4 | Negative | 5070198 - 5070764 | 21249.3 |
| hypothetical protein | ALO41_102765 | Not Available | Negative | 5070761 - 5070895 | 5243.6 |
| cold-shock protein | ALO41_02311 | P0A106 | Positive | 5071084 - 5071293 | 7727.11 |
| atp-binding protein, mrp/nbp35 family | ALO41_02312 | P72190 | Negative | 5071444 - 5072436 | 35158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








