Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, lysr:lysr, substrate-binding | ALO41_05025 | P23720 | Negative | 391685 - 392671 | 36384.4 |
| putative oxidoreductase | ALO41_02064 | A0A481WNM5 | Positive | 392670 - 393470 | 29762.2 |
| uncharacterized protein | ALO41_02065 | Q01609 | Negative | 393554 - 394519 | 35446.2 |
| major facilitator family transporter | ALO41_05026 | Q01602 | Negative | 394579 - 395880 | 45473.4 |
| regulatory protein, lysr:lysr, substrate-binding | ALO41_02067 | Q01610 | Positive | 395948 - 396841 | 33037.6 |
| mscs mechanosensitive ion channel | ALO41_02068 | P0AAT4 | Positive | 398128 - 399420 | 48784.1 |
| putative phage-related protein | ALO41_02753 | Not Available | Negative | 399513 - 400352 | 32744.8 |
| spovt/abrb-like protein | ALO41_02754 | Not Available | Positive | 402341 - 402598 | 9375.47 |
| toxin chpb | ALO41_02755 | P33647 | Positive | 402595 - 402942 | 12300.8 |
| uncharacterized protein | ALO41_02756 | Not Available | Positive | 402959 - 403216 | 9306.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








