Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALO41_02739 | Not Available | Negative | 4913835 - 4914740 | 34371.2 |
| branched-chain amino acid abc transporter, amino acid-binding protein | ALO41_02740 | Q9HUQ0 | Positive | 4915246 - 4916382 | 39959.5 |
| hypothetical protein | ALO41_100957 | Not Available | Positive | 4916424 - 4916534 | 3632.51 |
| high-affinity branched-chain amino acid abc transporter, permease protein brad | ALO41_02741 | P21627 | Positive | 4916541 - 4917458 | 32749.2 |
| high-affinity branched-chain amino acid abc transporter, permease protein brae | ALO41_02742 | Not Available | Positive | 4917461 - 4918774 | 47240.5 |
| branched-chain amino acid transport atp-binding protein | ALO41_02743 | Not Available | Positive | 4918771 - 4919646 | 32303.3 |
| high affinity branched-chain amino acid abc transporter, atp-binding protein | ALO41_100049 | P0A192 | Positive | 4919643 - 4920359 | 26226.1 |
| short chain dehydrogenase | ALO41_02744 | Q1QU27 | Positive | 4921080 - 4921844 | 27395.7 |
| putative n-acyl-d-glucosamine 2-epimerase | ALO41_100043 | P29954 | Negative | 4921887 - 4923101 | 45213.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ALO41_05198 | Q48NX0 | Negative | 4923174 - 4925099 | 69107.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








