Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO41_04385 | Not Available | Negative | 381402 - 381758 | 12827.4 |
| shikimate 5-dehydrogenase | ALO41_04386 | P44774 | Positive | 381969 - 382784 | 29034.8 |
| hypothetical protein | ALO41_05629 | Q48IK9 | Negative | 382825 - 383508 | 24538.4 |
| uncharacterized protein | ALO41_04388 | Not Available | Positive | 383618 - 384154 | 19781.0 |
| uncharacterized protein | ALO41_02058 | Not Available | Negative | 384597 - 384899 | 10997.8 |
| atp-dependent rna helicase srmb | ALO41_02059 | P21507 | Negative | 385096 - 386457 | 49583.5 |
| sensor histidine kinase | ALO41_05024 | Q04804 | Negative | 386602 - 387897 | 47786.6 |
| copper-sensing two-component system response regulator cpxr | ALO41_02061 | Not Available | Negative | 387849 - 388538 | 25808.2 |
| omp85 family outer membrane protein | ALO41_102045 | B5F8T8 | Positive | 388728 - 391127 | 87768.9 |
| uncharacterized protein | ALO41_02062 | Not Available | Positive | 391248 - 391661 | 15382.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








