Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosyl hydrolase family protein | ALO41_102892 | P25310 | Negative | 4813024 - 4813713 | 26171.8 |
| uncharacterized protein | ALO41_05356 | Not Available | Negative | 4814673 - 4815046 | 13145.3 |
| relaxase | ALO41_01268 | Not Available | Positive | 4815047 - 4815827 | 27566.2 |
| gntr transcriptional regulator | ALO41_01269 | Not Available | Positive | 4815895 - 4816266 | 13556.4 |
| uncharacterized protein | ALO41_01270 | Not Available | Positive | 4816325 - 4816552 | 8522.89 |
| phak-like protein | ALO41_01750 | Q88JX6 | Positive | 4817008 - 4817223 | 8278.63 |
| 4-carboxymuconolactone decarboxylase | ALO41_01751 | P20370 | Negative | 4817473 - 4817871 | 15009.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | ALO41_01752 | Q9I6Q8 | Negative | 4817868 - 4819229 | 49006.2 |
| protocatechuate 3,4-dioxygenase, alpha subunit | ALO41_01753 | P00436 | Negative | 4820690 - 4821292 | 22357.2 |
| protocatechuate 3,4-dioxygenase, beta subunit | ALO41_100094 | P00437 | Negative | 4821304 - 4822146 | 31289.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








