Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inosine/uridine-preferring nucleoside hydrolase | ALO41_03521 | Not Available | Negative | 4681288 - 4682313 | 36688.4 |
| ribokinase | ALO41_101055 | P0A9J7 | Negative | 4682737 - 4683657 | 31102.2 |
| ribose operon repressor | ALO41_03522 | B6EH86 | Negative | 4683688 - 4684704 | 36415.0 |
| ribose abc transporter, permease protein | ALO41_100026 | P0AGI3 | Negative | 4684706 - 4685698 | 34330.9 |
| ribose abc transporter atp-binding protein | ALO41_03523 | Q1ARR5 | Negative | 4685695 - 4687275 | 57301.5 |
| ribose abc transport system, periplasmic ribose-binding protein | ALO41_03524 | Q9I2F8 | Negative | 4687302 - 4688261 | 33803.1 |
| putative lipoprotein | ALO41_03525 | Not Available | Negative | 4688456 - 4688680 | 8149.83 |
| uncharacterized protein | ALO41_03526 | Not Available | Positive | 4688814 - 4689065 | 9350.91 |
| endonuclease i | ALO41_03527 | Q9WVZ1 | Positive | 4689070 - 4689771 | 26636.9 |
| uncharacterized protein | ALO41_05420 | Not Available | Positive | 4690138 - 4690242 | 3744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








