Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase beta subunit | ALO41_05417 | Q48JR8 | Negative | 4672534 - 4674912 | 86596.0 |
| phenylalanine--trna ligase alpha subunit | ALO41_05418 | Q48JR9 | Negative | 4674941 - 4675972 | 38853.7 |
| 50s ribosomal protein l20 | ALO41_03516 | Q48JS0 | Negative | 4676062 - 4676418 | 13314.6 |
| 50s ribosomal protein l35 | ALO41_100072 | Q48JS1 | Negative | 4676448 - 4676642 | 7368.38 |
| translation initiation factor if-3 | ALO41_03517 | P0A132 | Negative | 4676703 - 4677236 | 20020.6 |
| threonine--trna ligase | ALO41_03518 | Q48JS3 | Negative | 4677254 - 4679176 | 72666.7 |
| uncharacterized protein | ALO41_03519 | Not Available | Positive | 4679537 - 4679842 | 10778.8 |
| cold-shock protein | ALO41_03520 | P72188 | Positive | 4680138 - 4680350 | 7685.02 |
| putative lipoprotein | ALO41_100316 | Not Available | Negative | 4680415 - 4680936 | 18064.7 |
| hypothetical protein | ALO41_101019 | Not Available | Positive | 4681039 - 4681260 | 8029.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








