Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pentapeptide repeat protein | ALO41_01532 | Not Available | Negative | 4652569 - 4653552 | 36908.1 |
| uncharacterized protein | ALO41_02575 | Not Available | Positive | 4654408 - 4655352 | 35944.7 |
| isps1a | ALO41_102541 | Not Available | Positive | 4655529 - 4655930 | 15531.4 |
| transposase is4 family protein | ALO41_05159 | Not Available | Positive | 4655984 - 4656196 | 8325.21 |
| trna/tmrna -methyltransferase | ALO41_02876 | Q48DT0 | Negative | 4656404 - 4657489 | 41134.9 |
| xanthine/uracil permease family protein | ALO41_02877 | P31466 | Negative | 4657486 - 4658781 | 45011.6 |
| iron-sulfur cluster-binding protein | ALO41_02878 | P77165 | Positive | 4659046 - 4659576 | 18792.4 |
| oxidoreductase, molybdopterin-binding subunit | ALO41_02879 | Not Available | Positive | 4659573 - 4660562 | 35067.0 |
| putative aldehyde and xanthine dehydrogenase, molybdenum binding subunit | ALO41_100098 | P77489 | Positive | 4660559 - 4662760 | 79250.2 |
| cytochrome d ubiquinol oxidase, subunit i | ALO41_02880 | P26459 | Positive | 4663167 - 4664606 | 53485.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








