Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO41_04340 | Not Available | Positive | 330572 - 330790 | 7751.7 |
| uncharacterized protein | ALO41_04341 | Not Available | Positive | 330800 - 331231 | 14813.4 |
| type iii secretion component | ALO41_04342 | P55714 | Positive | 331235 - 332014 | 28146.5 |
| type iii secretion component | ALO41_04343 | Not Available | Positive | 332011 - 332631 | 22847.4 |
| type iii secretion system cytoplasmic protein | ALO41_04344 | Not Available | Positive | 332624 - 333217 | 21310.1 |
| type iii secretion component | ALO41_04345 | Q7ARI8 | Positive | 333214 - 334542 | 47617.6 |
| myosin heavy chain b | ALO41_04346 | Not Available | Positive | 334598 - 335101 | 19433.9 |
| uncharacterized protein | ALO41_05623 | Not Available | Negative | 335143 - 335253 | 3920.81 |
| type iii secretion system protein yscr | ALO41_04347 | P55720 | Positive | 336150 - 336806 | 23990.9 |
| type iii secretion system integral membrane protein | ALO41_04348 | Not Available | Positive | 336811 - 337080 | 9462.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








