Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mocd | ALO41_05597 | Not Available | Negative | 4401987 - 4403165 | 45004.7 |
| laci family transcriptional regulator | ALO41_04222 | Not Available | Positive | 4403241 - 4404290 | 37460.3 |
| sigma-54 dependent transcriptional regulator | ALO41_05598 | P26047 | Negative | 4404297 - 4406309 | 72924.5 |
| gfo/idh/moca family oxidoreductase | ALO41_04224 | Not Available | Positive | 4406485 - 4406682 | 6765.23 |
| yd repeat protein | ALO41_03139 | Not Available | Positive | 4406698 - 4407642 | 34313.8 |
| hypothetical protein | ALO41_102230 | Not Available | Positive | 4407692 - 4407805 | 4001.99 |
| rhs family protein | ALO41_05310 | Not Available | Positive | 4407881 - 4408442 | 20116.7 |
| rhs element vgr protein | ALO41_05373 | Not Available | Positive | 4408443 - 4408683 | 9013.85 |
| rok family protein | ALO41_02553 | P16557 | Negative | 4409265 - 4410395 | 41524.9 |
| glycerol-3-phosphate abc transporter periplasmic glycerol-3-phosphate-binding protein | ALO41_02554 | Q8UB32 | Positive | 4410561 - 4411877 | 47380.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








