Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| papain cysteine protease family protein | ALO41_04205 | Q5UQE9 | Positive | 4381360 - 4382127 | 28645.1 |
| xylose activator xylr | ALO41_05593 | P0ACI5 | Negative | 4382133 - 4383332 | 43702.7 |
| xylose isomerase | ALO41_04207 | Q48J73 | Positive | 4383515 - 4384831 | 49123.7 |
| xylose abc transporter, periplasmic xylose-binding protein xylf | ALO41_04208 | P37387 | Positive | 4384971 - 4385972 | 35908.2 |
| xylose import atp-binding protein xylg | ALO41_04209 | Q48J74 | Positive | 4386066 - 4387622 | 56251.6 |
| xylose abc transporter, permease protein xylh | ALO41_04210 | P0AGI6 | Positive | 4387623 - 4388759 | 39908.3 |
| type iii chaperone shcv | ALO41_04211 | Not Available | Positive | 4388903 - 4389289 | 14450.2 |
| amine oxidase, flavin-containing | ALO41_04212 | Not Available | Negative | 4390624 - 4391091 | 16448.6 |
| amine oxidase, flavin-containing | ALO41_04213 | Q4JHE1 | Negative | 4391099 - 4392682 | 57473.9 |
| amino acid abc transporter periplasmic amino acid-binding protein | ALO41_04214 | Not Available | Negative | 4392705 - 4393634 | 32798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








