Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO41_100201 | Not Available | Negative | 4308693 - 4309244 | 21248.7 |
| fatty acid desaturase | ALO41_00265 | Not Available | Negative | 4309325 - 4310419 | 42318.4 |
| c-5 sterol desaturase | ALO41_00266 | Q8BS35 | Negative | 4310412 - 4311545 | 42647.0 |
| isrso5-transposase preotein | ALO41_02279 | Not Available | Positive | 4316812 - 4317885 | 40316.4 |
| transposase, is66 family | ALO41_02676 | Not Available | Negative | 4318125 - 4318262 | 5220.4 |
| zinc-containing alcohol dehydrogenase superfamily protein | ALO41_02677 | Not Available | Negative | 4318366 - 4318686 | 11350.7 |
| mechanosensitive ion channel family protein | ALO41_05184 | P77338 | Negative | 4318683 - 4319837 | 40608.2 |
| glutathione s-transferase family protein | ALO41_02678 | Not Available | Positive | 4321372 - 4322073 | 26578.4 |
| transcriptional regulatory protein | ALO41_02679 | Not Available | Positive | 4322231 - 4322794 | 20330.4 |
| transcriptional regulator | ALO41_02680 | Not Available | Positive | 4322921 - 4323649 | 26861.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








