Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO41_05622 | Not Available | Negative | 319125 - 322619 | 124467.0 |
| uncharacterized protein | ALO41_04331 | Not Available | Positive | 323170 - 323331 | 5614.59 |
| smad/fha domain protein | ALO41_04332 | Not Available | Positive | 323454 - 324392 | 33796.7 |
| uncharacterized protein | ALO41_04333 | Not Available | Positive | 324389 - 324748 | 13427.1 |
| putative type iii secretion component | ALO41_04334 | Not Available | Positive | 324745 - 325083 | 12521.2 |
| type iii secretion component | ALO41_04335 | A1JU76 | Positive | 325080 - 327263 | 79172.1 |
| type ii/iii secretion system protein | ALO41_04336 | Not Available | Positive | 327260 - 328573 | 45603.6 |
| uncharacterized protein | ALO41_04337 | Not Available | Positive | 328586 - 329002 | 15034.2 |
| tpr domain-containing protein | ALO41_04338 | Not Available | Negative | 329005 - 329787 | 28200.7 |
| type iii secretion component | ALO41_04339 | Not Available | Positive | 329939 - 330550 | 22542.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








