Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator/sensory box/ggdef domain/eal domain-containing protein | ALO41_01032 | Not Available | Negative | 4227454 - 4229592 | 79367.4 |
| alginate lyase | ALO41_01033 | Not Available | Positive | 4229907 - 4230578 | 25225.3 |
| sodium/proline symporter | ALO41_01034 | P07117 | Negative | 4230677 - 4232164 | 52798.3 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | ALO41_01035 | O52485 | Positive | 4232613 - 4236566 | 142926.0 |
| acyl-coa dehydrogenase domain-containing protein | ALO41_01036 | Q5LLW7 | Positive | 4236794 - 4238596 | 66549.1 |
| uncharacterized protein | ALO41_01037 | Not Available | Negative | 4238618 - 4238920 | 11393.6 |
| uncharacterized protein | ALO41_01038 | Not Available | Negative | 4238917 - 4241235 | 86428.4 |
| hypothetical protein | ALO41_101150 | Not Available | Negative | 4241342 - 4241602 | 9725.71 |
| k antiporter nhap2 | ALO41_01039 | Q48P74 | Positive | 4241764 - 4243506 | 61391.9 |
| putative potassium efflux system protein kefa | ALO41_01040 | Not Available | Positive | 4243545 - 4246934 | 125595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








