Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cysteine peptidase toxin | ALO41_01016 | Not Available | Positive | 4198653 - 4199759 | 41486.8 |
| type iii effector hopac1 | ALO41_100746 | Not Available | Positive | 4200815 - 4202353 | 55649.6 |
| uncharacterized protein | ALO41_01017 | Not Available | Positive | 4202389 - 4204746 | 88185.3 |
| uncharacterized protein | ALO41_04765 | Not Available | Negative | 4204757 - 4206205 | 54205.5 |
| heptose kinase wapq, eukaryotic type | ALO41_01019 | Not Available | Negative | 4206978 - 4207712 | 28551.2 |
| lipopolysaccharide core heptose kinase rfap | ALO41_04766 | Q9HUF7 | Negative | 4207712 - 4208521 | 30754.3 |
| lipopolysaccharide core biosynthesis protein rfag | ALO41_01021 | P25740 | Negative | 4208518 - 4209639 | 42100.6 |
| lipopolysaccharide heptosyltransferase i | ALO41_01022 | P26469 | Negative | 4209639 - 4210703 | 39521.5 |
| adp-heptose--lps heptosyltransferase ii | ALO41_01023 | P37692 | Negative | 4210706 - 4211740 | 38053.1 |
| hypothetical protein | ALO41_101141 | Not Available | Positive | 4211657 - 4211827 | 6501.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








