Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector hopq1 | ALO41_04816 | Not Available | Negative | 4174942 - 4176303 | 49489.1 |
| ispsy3, transposase | ALO41_01262 | Not Available | Positive | 4176594 - 4176965 | 13979.9 |
| ispsy3, transposase | ALO41_04817 | Not Available | Positive | 4176993 - 4177232 | 9415.12 |
| phosphomethylpyrimidine synthase | ALO41_01000 | Q87VG1 | Negative | 4177343 - 4179229 | 69458.8 |
| type i secretion outer membrane protein, tolc | ALO41_01001 | Q9K2Y1 | Positive | 4179617 - 4181089 | 54183.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | ALO41_01002 | P0AC77 | Negative | 4181251 - 4182531 | 46835.2 |
| transporter, small multidrug resistance family | ALO41_01003 | Q9HUH5 | Positive | 4182601 - 4182933 | 11731.2 |
| oxidoreductase, fad-binding protein | ALO41_04762 | Q9HUH4 | Positive | 4182955 - 4184157 | 42984.0 |
| oxidoreductase, aldo/keto reductase family protein | ALO41_100097 | P46336 | Positive | 4184154 - 4184969 | 29243.1 |
| uncharacterized protein | ALO41_01005 | Not Available | Positive | 4185006 - 4185962 | 36341.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








