Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO41_03348 | Not Available | Negative | 4160249 - 4161442 | 43928.4 |
| m16 family peptidase | ALO41_05385 | P45181 | Negative | 4161539 - 4162951 | 53026.3 |
| na/pi cotransporter family protein | ALO41_03350 | Q8X5Z7 | Negative | 4162973 - 4164625 | 59669.3 |
| methyl-accepting chemotaxis protein | ALO41_05390 | Not Available | Negative | 4165067 - 4167064 | 70893.8 |
| transcriptional regulator, lysr family | ALO41_03352 | Not Available | Negative | 4167228 - 4168148 | 34610.9 |
| putative multidrug resistance protein | ALO41_03353 | Q88BA2 | Positive | 4168304 - 4169683 | 48467.9 |
| ggdef domain/eal domain-containing protein | ALO41_03354 | Not Available | Negative | 4169696 - 4171360 | 61962.9 |
| atp-dependent dna helicase rep | ALO41_03355 | Q9L6S1 | Positive | 4171566 - 4173575 | 76604.6 |
| xanthine phosphoribosyltransferase | ALO41_03356 | Q48QC3 | Positive | 4173629 - 4174198 | 20171.5 |
| type iii effector hopd1 | ALO41_01260 | Q8RK07 | Positive | 4174260 - 4174826 | 20048.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








