Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taud/tfda family dioxygenase | ALO41_04304 | Not Available | Positive | 290717 - 290842 | 4584.62 |
| dioxygenase, taud/tfda family | ALO41_04305 | Q700X4 | Positive | 290882 - 291583 | 25744.6 |
| uncharacterized protein | ALO41_04306 | Not Available | Positive | 291676 - 291912 | 8606.47 |
| bro family, n-terminal domain protein | ALO41_04307 | Not Available | Negative | 291979 - 292518 | 20987.7 |
| gaf domain-containing protein | ALO41_04308 | Not Available | Negative | 292915 - 293418 | 18296.7 |
| methyl-accepting chemotaxis protein | ALO41_04309 | Not Available | Positive | 293651 - 295543 | 67847.5 |
| lysr family transcriptional regulator | ALO41_04310 | Not Available | Negative | 295614 - 296567 | 34709.1 |
| acetylornithine aminotransferase | ALO41_04311 | Not Available | Positive | 296623 - 297588 | 34670.9 |
| acetylornithine aminotransferase | ALO41_04312 | Q882K8 | Positive | 297589 - 297825 | 8497.66 |
| uncharacterized protein | ALO41_04313 | Not Available | Positive | 297950 - 298495 | 19128.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








