Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large-conductance mechanosensitive channel | ALO41_00133 | Q48DU1 | Negative | 3920968 - 3921414 | 15715.7 |
| dna repair protein rada | ALO41_00134 | P96963 | Positive | 3921609 - 3922976 | 48916.5 |
| cyclic diguanosine monophosphate-binding protein | ALO41_00135 | Q9HVI1 | Negative | 3922991 - 3923392 | 15238.3 |
| carbon starvation protein csta | ALO41_00136 | P39396 | Positive | 3923651 - 3925726 | 74149.9 |
| uncharacterized protein | ALO41_00137 | P0AAT0 | Positive | 3925754 - 3925951 | 7597.14 |
| putative nucleotide-binding protein | ALO41_00138 | P24203 | Positive | 3926047 - 3927024 | 36058.6 |
| serine hydroxymethyltransferase | ALO41_04594 | Q48DU7 | Negative | 3927130 - 3928395 | 45320.2 |
| type iii effector hopae1 | ALO41_00140 | Q48DU8 | Positive | 3928726 - 3931464 | 97506.5 |
| asp-trnaasn/glu-trnagln amidotransferase a subunit and related amidase | ALO41_102875 | Not Available | Negative | 3931549 - 3931764 | 7367.8 |
| regulatory protein, luxr | ALO41_00141 | Not Available | Negative | 3931779 - 3931946 | 6098.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








