Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| menaquinone biosynthesis related protein, putative dhna-coa thioesterase | ALO41_00922 | O07015 | Negative | 3824240 - 3825061 | 29909.4 |
| hypothetical protein | ALO41_101421 | Not Available | Positive | 3825267 - 3825380 | 3900.5 |
| cytosine deaminase | ALO41_00923 | P78594 | Negative | 3825400 - 3825837 | 15957.2 |
| uncharacterized protein | ALO41_00924 | Not Available | Negative | 3825866 - 3826366 | 18311.6 |
| histidine transporter, periplasmic histidine-binding protein | ALO41_100015 | Not Available | Negative | 3826501 - 3827526 | 36883.1 |
| acetyltransferase | ALO41_00925 | Not Available | Positive | 3827643 - 3827876 | 8569.41 |
| acetyltransferase | ALO41_00926 | Not Available | Positive | 3827861 - 3828055 | 7217.91 |
| peptide deformylase | ALO41_00927 | Q886I1 | Negative | 3828080 - 3828619 | 20061.2 |
| ribonuclease bn | ALO41_101415 | O34437 | Negative | 3828666 - 3829634 | 35517.1 |
| mismatched base pair and cruciform dna recognition protein | ALO41_00928 | Q886I3 | Negative | 3829861 - 3830052 | 6473.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








