Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna large subunit methyltransferase m | ALO41_00793 | Q48GK0 | Positive | 267218 - 268291 | 40304.8 |
| xami dna methyltransferase | ALO41_05666 | P96188 | Negative | 269790 - 271223 | 52409.4 |
| plasmid-related protein | ALO41_03084 | Not Available | Negative | 271482 - 271670 | 7243.71 |
| hypothetical protein | ALO41_102804 | Not Available | Positive | 271724 - 271855 | 5126.31 |
| ispsy14, transposase | ALO41_05363 | Q51761 | Negative | 272105 - 272561 | 17849.3 |
| putative transposase subunit | ALO41_05364 | Q53201 | Negative | 272351 - 273394 | 39023.7 |
| uncharacterized protein impc | ALO41_04291 | Q9I748 | Positive | 273526 - 274674 | 43226.1 |
| type vi secretion system lysozyme-related protein | ALO41_04292 | Not Available | Positive | 274785 - 275090 | 11215.7 |
| uncharacterized protein impg | ALO41_04293 | Q9I744 | Positive | 275183 - 276349 | 43581.3 |
| imph | ALO41_100417 | Not Available | Positive | 276935 - 277954 | 38919.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








