Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter periplasmic substrate-binding protein | ALO41_04999 | Not Available | Negative | 3700385 - 3702355 | 73751.4 |
| abc transporter, periplasmic substrate-binding protein | ALO41_01966 | Q8YC41 | Negative | 3702238 - 3704205 | 74222.5 |
| membrane-bound lytic murein transglycosylase d | ALO41_05001 | Not Available | Negative | 3704205 - 3705791 | 58965.6 |
| hydroxyacylglutathione hydrolase | ALO41_100561 | Q48KX8 | Negative | 3705891 - 3706913 | 38054.2 |
| sam-dependent methyltransferase | ALO41_100548 | Not Available | Positive | 3706716 - 3707513 | 29166.3 |
| ribonuclease h | ALO41_01968 | Q87YT0 | Positive | 3707560 - 3708009 | 16683.8 |
| uncharacterized protein | ALO41_05002 | Not Available | Negative | 3708031 - 3708942 | 33467.8 |
| serine acetyltransferase | ALO41_01970 | Q9US33 | Negative | 3708952 - 3709716 | 26914.1 |
| dna polymerase iii subunit epsilon | ALO41_05003 | P03007 | Positive | 3709962 - 3710756 | 28793.2 |
| acetyltransferase | ALO41_01972 | P13018 | Positive | 3710778 - 3711332 | 20977.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








