Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma e regulatory protein, mucb/rseb | ALO41_04562 | P38108 | Negative | 3644239 - 3645201 | 34898.7 |
| alginate regulatory protein muca | ALO41_00024 | P38107 | Negative | 3645207 - 3645797 | 20815.6 |
| rna polymerase sigma factor | ALO41_00025 | Q06198 | Negative | 3645831 - 3646418 | 22530.7 |
| l-aspartate oxidase | ALO41_00026 | Q51363 | Positive | 3646910 - 3648526 | 59701.8 |
| hypothetical protein | ALO41_100565 | Not Available | Negative | 3648495 - 3648959 | 17545.8 |
| uncharacterized protein | ALO41_00027 | Q48EU3 | Negative | 3648943 - 3649197 | 10328.5 |
| glycine cleavage t-protein | ALO41_00028 | B1LD99 | Positive | 3649346 - 3650293 | 34069.9 |
| hd-gyp domain | ALO41_00029 | Not Available | Positive | 3650408 - 3651229 | 30499.1 |
| sensor histidine kinase tcte | ALO41_00030 | Q8X524 | Negative | 3651232 - 3652614 | 50565.8 |
| dna-binding response regulator tctd | ALO41_00031 | E1WA34 | Negative | 3652607 - 3653437 | 30278.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








