Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligogalacturonate-specific porin protein kdgm | ALO41_02948 | Not Available | Negative | 3582026 - 3582748 | 28237.8 |
| dipeptide abc transporter atp-binding protein | ALO41_02949 | P72479 | Negative | 3582884 - 3583648 | 28247.0 |
| dipeptide abc transporter atp-binding protein | ALO41_100236 | Q8YDH0 | Negative | 3583659 - 3584585 | 34442.1 |
| dipeptide abc transporter, permease protein dppc | ALO41_05252 | Not Available | Negative | 3584548 - 3585456 | 32110.2 |
| putative dipeptide abc transporter, permease protein dppb | ALO41_100363 | Not Available | Negative | 3585453 - 3586619 | 42190.0 |
| dipeptide abc transporter periplasmic dipeptide-binding protein | ALO41_02951 | Not Available | Negative | 3586531 - 3588153 | 60111.4 |
| mandelate racemase/muconate lactonizing enzyme family protein | ALO41_100502 | A9CEQ8 | Negative | 3588272 - 3589456 | 43505.1 |
| hypothetical protein | ALO41_102941 | Not Available | Positive | 3589747 - 3589887 | 5335.46 |
| uncharacterized protein | ALO41_02952 | Q8Z543 | Positive | 3589946 - 3590641 | 25158.0 |
| pap2 superfamily protein | ALO41_02953 | Not Available | Positive | 3590641 - 3591510 | 32709.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








