Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ALO41_00153 | Not Available | Positive | 244324 - 245061 | 27315.0 |
| uncharacterized protein | ALO41_04598 | Not Available | Positive | 245685 - 246650 | 36678.9 |
| uncharacterized protein | ALO41_00155 | Not Available | Positive | 246693 - 247640 | 35834.9 |
| nonribosomal peptide synthetase | ALO41_00156 | Not Available | Positive | 247637 - 251071 | 126330.0 |
| uncharacterized protein | ALO41_00157 | Not Available | Positive | 251093 - 251581 | 17240.3 |
| effector protein avrpphdpsv | ALO41_04844 | Not Available | Negative | 251918 - 253385 | 51952.6 |
| uncharacterized protein | ALO41_02626 | Not Available | Negative | 253424 - 253642 | 8029.61 |
| bacterial transferase hexapeptide repeat protein | ALO41_02627 | P40882 | Negative | 253642 - 254166 | 18736.6 |
| mutt/nudix family protein | ALO41_02628 | A4WBH1 | Negative | 254258 - 254854 | 22172.4 |
| mutt/nudix family protein | ALO41_02629 | P93740 | Positive | 255005 - 255556 | 20826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








