Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO41_03410 | Not Available | Negative | 3492575 - 3493042 | 17772.8 |
| type iii negative regulator of hrp expression hrpv | ALO41_03411 | Not Available | Negative | 3493393 - 3493740 | 13360.9 |
| hrpt | ALO41_03412 | Not Available | Negative | 3493743 - 3493946 | 7475.96 |
| putative hrp/hrc protein | ALO41_05401 | Q01723 | Negative | 3493943 - 3496066 | 77408.6 |
| hrpg | ALO41_03414 | Not Available | Negative | 3496044 - 3496475 | 15524.4 |
| putative hrp/hrc protein | ALO41_03415 | Not Available | Negative | 3496770 - 3497408 | 23580.0 |
| type iii secretion component protein hrcj | ALO41_03416 | Not Available | Negative | 3497387 - 3497914 | 20200.1 |
| type iii secretion component protein hrcj | ALO41_03417 | Q01251 | Negative | 3497914 - 3498720 | 29268.6 |
| type iii secretion component protein hrpb | ALO41_100241 | Not Available | Negative | 3498729 - 3499103 | 12866.3 |
| type iii helper protein hrpz1 | ALO41_03418 | Q52481 | Negative | 3499131 - 3500174 | 35313.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








