Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hrp/hrc protein | ALO41_03401 | Not Available | Positive | 3485094 - 3486068 | 35346.2 |
| type iii secretion system cytoplasmic atpase | ALO41_05400 | Q8RK01 | Positive | 3486062 - 3487414 | 48502.6 |
| type iii secretion system protein | ALO41_03403 | Not Available | Positive | 3487417 - 3487863 | 17382.5 |
| type iii secretion system protein | ALO41_03404 | Not Available | Positive | 3487870 - 3488442 | 20428.2 |
| type iii secretion protein hrcqa | ALO41_03405 | O85093 | Positive | 3488439 - 3489155 | 26025.2 |
| type iii secretion system protein | ALO41_03406 | O85094 | Positive | 3489145 - 3489534 | 14207.2 |
| type iii secretion system inner membrane protein | ALO41_03407 | Q60236 | Positive | 3489531 - 3490184 | 24135.5 |
| type iii secretion component protein hrcs | ALO41_03408 | P69982 | Positive | 3490192 - 3490458 | 9407.06 |
| type iii secretion system inner membrane protein | ALO41_03409 | Not Available | Positive | 3490459 - 3491253 | 28320.9 |
| type iii secretion protein hrcu | ALO41_100506 | P69986 | Positive | 3491250 - 3492329 | 39995.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








