Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO41_200228 | Not Available | Positive | 3472647 - 3473060 | 15033.3 |
| hypothetical protein | ALO41_200165 | Not Available | Positive | 3473177 - 3473764 | 21592.1 |
| hypothetical protein | ALO41_200070 | P33008 | Positive | 3473869 - 3475275 | 50157.2 |
| hypothetical protein | ALO41_200128 | P37248 | Negative | 3475377 - 3476138 | 28982.9 |
| hypothetical protein | ALO41_200109 | Not Available | Negative | 3476340 - 3476690 | 13197.6 |
| type iii effector hopx1 | ALO41_05200 | Not Available | Positive | 3476998 - 3478152 | 41431.7 |
| hrpk | ALO41_100179 | P41501 | Negative | 3478689 - 3481088 | 83606.6 |
| rna polymerase sigma factor | ALO41_03399 | P37929 | Negative | 3481072 - 3481626 | 21181.3 |
| type iii secretion component protein hrcj | ALO41_03400 | Q05395 | Positive | 3481870 - 3482976 | 40576.3 |
| type iii secretion component protein hrcv | ALO41_100042 | P35655 | Positive | 3482973 - 3485060 | 76622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








