Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yrbi family phosphatase | ALO41_01477 | Q8ZB47 | Positive | 3459470 - 3460009 | 19478.6 |
| uncharacterized protein | ALO41_01478 | Not Available | Positive | 3460018 - 3460590 | 21421.6 |
| osta family protein | ALO41_01479 | P0ADV3 | Positive | 3460577 - 3461125 | 19682.6 |
| abc transporter, atp-binding protein | ALO41_01480 | P45073 | Positive | 3461126 - 3461851 | 26500.2 |
| rna polymerase sigma-54 factor | ALO41_01481 | P0A171 | Positive | 3462058 - 3463527 | 55800.9 |
| ribosomal subunit interface protein raia/yfia | ALO41_01482 | P0A147 | Positive | 3463603 - 3463911 | 11610.2 |
| pts iia-like nitrogen-regulatory protein ptsn | ALO41_01483 | Q9HVV4 | Positive | 3463923 - 3464387 | 16566.2 |
| nucleotide-binding protein | ALO41_01484 | Q48EB2 | Positive | 3464390 - 3465247 | 32254.8 |
| phosphocarrier protein hpr | ALO41_01485 | Q9HVV2 | Positive | 3465264 - 3465536 | 9730.95 |
| superoxide dismutase | ALO41_01486 | P77929 | Negative | 3465721 - 3466332 | 22792.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








