Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase/response regulator | ALO41_00322 | Q9HUI3 | Negative | 3405273 - 3406895 | 59433.2 |
| luxr family dna-binding response regulator | ALO41_00323 | P29369 | Negative | 3406909 - 3407538 | 22616.4 |
| hypothetical protein | ALO41_00324 | Not Available | Negative | 3409278 - 3409400 | 4413.61 |
| putative seca translocase subunit | ALO41_02533 | Not Available | Negative | 3409636 - 3410349 | 26615.0 |
| pilt domain-containing protein | ALO41_02534 | Not Available | Negative | 3413359 - 3413778 | 15199.6 |
| uncharacterized protein | ALO41_02535 | Not Available | Negative | 3413778 - 3414044 | 9819.58 |
| type iii effector hopg1 | ALO41_03505 | Not Available | Positive | 3414432 - 3415913 | 54723.5 |
| uncharacterized protein | ALO41_02654 | Not Available | Positive | 3416748 - 3417146 | 14591.4 |
| uncharacterized protein | ALO41_02655 | Not Available | Positive | 3417210 - 3417650 | 16523.9 |
| uncharacterized protein | ALO41_05179 | Not Available | Negative | 3417702 - 3417830 | 4913.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








