Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25 | ALO41_01106 | Q48MW0 | Positive | 3349802 - 3350413 | 21930.3 |
| peptidyl-trna hydrolase | ALO41_01107 | Q48MW1 | Positive | 3350578 - 3351162 | 20947.2 |
| ribosome-binding atpase ychf | ALO41_01108 | Q7VMI2 | Positive | 3351184 - 3352284 | 40012.1 |
| phage integrase family protein | ALO41_01109 | P08320 | Positive | 3352496 - 3353665 | 44881.7 |
| uncharacterized protein | ALO41_01110 | Not Available | Positive | 3353662 - 3354510 | 31302.3 |
| hypothetical protein | ALO41_103017 | Not Available | Positive | 3354784 - 3355296 | 19003.1 |
| hypothetical protein | ALO41_102647 | P68910 | Positive | 3355360 - 3356007 | 23328.2 |
| acetyltransferase, gnat family protein | ALO41_04784 | Not Available | Positive | 3356382 - 3356900 | 19305.1 |
| php n-terminal domain protein | ALO41_01111 | Q97QY9 | Negative | 3358285 - 3360789 | 93212.3 |
| outer membrane autotransporter barrel | ALO41_03197 | Not Available | Negative | 3360839 - 3361036 | 7028.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








