Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase, hamp region:bacterial chemotaxis sensory transducer | ALO41_102406 | Q9Z429 | Positive | 3250808 - 3251209 | 14271.8 |
| nad transhydrogenase subunit alpha | ALO41_01984 | Q2RSB2 | Positive | 3251800 - 3252921 | 38779.1 |
| Trna-leu | Not Available | Not Available | Positive | 3253246 - 3253330 | Not Available |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ALO41_01634 | Q9L6W2 | Positive | 3253448 - 3254512 | 38744.0 |
| queuine trna-ribosyltransferase | ALO41_100223 | Q887B0 | Positive | 3254509 - 3255642 | 41703.7 |
| preprotein translocase, subunit yajc | ALO41_01635 | P0ADZ9 | Positive | 3255696 - 3256031 | 11826.5 |
| protein translocase subunit secd | ALO41_01636 | Q9HXI1 | Positive | 3256095 - 3257963 | 67381.5 |
| protein-export membrane protein secf | ALO41_01637 | Q9HXI2 | Positive | 3257973 - 3258884 | 32987.6 |
| outer membrane protein | ALO41_01638 | P0AB36 | Positive | 3258993 - 3259532 | 18582.3 |
| inositol-1-monophosphatase | ALO41_01639 | Q9HXI4 | Negative | 3259599 - 3260414 | 29555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








