Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase is3 family protein | ALO41_02891 | Not Available | Negative | 3155870 - 3156202 | 12162.8 |
| uncharacterized protein | ALO41_02892 | Not Available | Positive | 3157528 - 3158262 | 26708.5 |
| atp-dependent helicase hrpb | ALO41_02893 | Not Available | Positive | 3158664 - 3161219 | 94039.0 |
| site-specific recombinase, phage integrase family protein | ALO41_02894 | Not Available | Negative | 3161291 - 3162718 | 54467.8 |
| site-specific recombinase, phage integrase family domain protein | ALO41_02895 | Not Available | Negative | 3163353 - 3165449 | 79574.6 |
| hypothetical protein | ALO41_101968 | Not Available | Negative | 3165433 - 3167856 | 91521.0 |
| atp-dependent helicase hrpb | ALO41_02896 | Not Available | Positive | 3167856 - 3169982 | 78043.0 |
| hypothetical protein | ALO41_200284 | Not Available | Positive | 3171377 - 3172171 | 29234.5 |
| hypothetical protein | ALO41_200048 | Not Available | Positive | 3172168 - 3172722 | 20793.9 |
| hypothetical protein | ALO41_200186 | Not Available | Positive | 3172724 - 3173407 | 26255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








