Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | ALO41_01334 | Not Available | Positive | 199910 - 200518 | 22366.8 |
| competence protein comea helix-hairpin-helix repeat region | ALO41_01335 | Q57134 | Negative | 200623 - 200970 | 12169.5 |
| nucleotide sugar epimerase/dehydratase wbpm | ALO41_01336 | P39853 | Negative | 201130 - 203127 | 73813.7 |
| glycosyl transferase, group 4 family protein | ALO41_100202 | O34753 | Negative | 203224 - 204240 | 36602.4 |
| udp-glucose 4-epimerase | ALO41_01337 | Q56623 | Negative | 204233 - 205213 | 35105.1 |
| metallo-beta-lactamase family protein | ALO41_04830 | Q5SLP1 | Negative | 205471 - 207072 | 59120.2 |
| uncharacterized protein | ALO41_01339 | Not Available | Negative | 207329 - 207571 | 8818.48 |
| integration host factor subunit beta | ALO41_01340 | Q885T0 | Negative | 207596 - 207892 | 11076.3 |
| 30s ribosomal protein s1 | ALO41_04832 | Q9HZ71 | Negative | 208213 - 209910 | 62543.4 |
| cytidylate kinase | ALO41_01342 | Q48FN1 | Negative | 210026 - 210715 | 24565.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








