Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase, alpha subunit | ALO41_01161 | P51961 | Positive | 2887630 - 2888292 | 23440.0 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | ALO41_01162 | Q9HWX4 | Positive | 2888314 - 2889405 | 39715.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | ALO41_01163 | Q889Q6 | Positive | 2889535 - 2890011 | 16521.1 |
| n utilization substance protein b -like protein | ALO41_01164 | Q48DC2 | Positive | 2890008 - 2890505 | 18635.2 |
| thiamine-monophosphate kinase | ALO41_01165 | P55881 | Positive | 2890522 - 2891487 | 33146.8 |
| gtp cyclohydrolase-2 | ALO41_01166 | Q889Q3 | Positive | 2891583 - 2892239 | 23564.4 |
| uncharacterized protein | ALO41_01167 | Not Available | Positive | 2892236 - 2892655 | 15059.1 |
| urease accessory protein | ALO41_01168 | P27650 | Negative | 2892710 - 2893282 | 18914.6 |
| urease accessory protein ureg | ALO41_01169 | Q48DC7 | Negative | 2893308 - 2893925 | 22045.6 |
| urease accessory protein uref | ALO41_01170 | Q48DC8 | Negative | 2893947 - 2894621 | 25020.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








