Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase alat | ALO41_100364 | P0A960 | Positive | 182365 - 183807 | 53074.9 |
| protease htpx | ALO41_01319 | Q885Q3 | Positive | 184075 - 184962 | 32286.7 |
| uncharacterized protein | ALO41_01320 | Not Available | Positive | 185015 - 185197 | 6577.33 |
| extradiol-type ring-opening dioxygenase | ALO41_01321 | Q949R4 | Positive | 185287 - 186054 | 27920.4 |
| atp-dependent rna helicase dead | ALO41_04828 | P9WH04 | Negative | 186145 - 187857 | 62072.3 |
| hypothetical protein | ALO41_100636 | Not Available | Negative | 187894 - 188103 | 7817.77 |
| putative methyltransferase | ALO41_01323 | Not Available | Negative | 188279 - 189040 | 28359.9 |
| 3-deoxy-7-phosphoheptulonate synthase | ALO41_01324 | P29976 | Positive | 189212 - 190558 | 49954.5 |
| lysr family transcriptional regulator | ALO41_01325 | P16931 | Positive | 190878 - 191774 | 33245.1 |
| putative membrane protein | ALO41_100536 | Not Available | Negative | 191764 - 192561 | 28212.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








