Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f-box domain-containing protein | ALO41_05174 | Not Available | Negative | 2751945 - 2753039 | 39960.0 |
| glycine betaine/carnitine/choline abc transporter atp-binding protein | ALO41_02644 | Not Available | Negative | 2753330 - 2753497 | 6068.19 |
| uncharacterized protein | ALO41_02645 | Not Available | Negative | 2753624 - 2753746 | 4655.24 |
| l-proline/glycine/betaine abc transport atp-binding protein | ALO41_02646 | Q8ZPK4 | Negative | 2754051 - 2755220 | 43424.2 |
| substrate-binding region of abc-type glycine betaine transport system | ALO41_100441 | Q9HXC4 | Negative | 2755884 - 2756777 | 33193.8 |
| glycine betaine/carnitine/choline abc transporter, permease protein | ALO41_02647 | Q8ZPK1 | Negative | 2756792 - 2757505 | 24802.6 |
| hypothetical protein | ALO41_101054 | Not Available | Negative | 2757517 - 2757858 | 12065.6 |
| peptide chain release factor 3 | ALO41_02648 | Q48DZ2 | Positive | 2757850 - 2759433 | 59679.4 |
| uncharacterized protein | ALO41_02649 | Not Available | Positive | 2759680 - 2759922 | 9300.25 |
| peptidyl-prolyl cis-trans isomerase | ALO41_02650 | P0A9L3 | Negative | 2760002 - 2760619 | 21737.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








