Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | ALO41_00242 | Not Available | Negative | 2620538 - 2621329 | 27875.7 |
| homogentisate 1,2-dioxygenase | ALO41_00243 | Q48GS7 | Positive | 2621468 - 2622775 | 48518.6 |
| fumarylacetoacetase | ALO41_00244 | Q6H7M1 | Positive | 2622772 - 2624067 | 46370.4 |
| tetr family transcriptional regulator | ALO41_00245 | Not Available | Negative | 2624086 - 2624700 | 23268.9 |
| hypothetical protein | ALO41_102759 | Not Available | Negative | 2624815 - 2624931 | 4453.25 |
| uncharacterized protein | ALO41_00246 | P9WKP2 | Positive | 2624895 - 2626004 | 42324.2 |
| major facilitator transporter | ALO41_00247 | P17583 | Positive | 2626148 - 2627335 | 42111.5 |
| lysr family transcriptional regulator | ALO41_00248 | P04680 | Positive | 2627365 - 2628348 | 37312.1 |
| uncharacterized protein | ALO41_00249 | Not Available | Negative | 2628355 - 2628504 | 5403.09 |
| thij/pfpi | ALO41_04619 | Q5AF03 | Negative | 2628631 - 2629374 | 26471.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








