Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxygenase subunit | ALO41_00180 | Not Available | Positive | 2546234 - 2547472 | 45825.8 |
| nitrilotriacetate monooxygenase component b | ALO41_00181 | Q6Q271 | Positive | 2547496 - 2548032 | 18968.3 |
| uncharacterized protein | ALO41_00182 | Not Available | Positive | 2548210 - 2549007 | 29799.8 |
| aerotaxis receptor aer | ALO41_00183 | Not Available | Positive | 2549076 - 2550644 | 56517.0 |
| benabc operon transcriptional activator benr | ALO41_100634 | P07859 | Negative | 2550812 - 2551822 | 37279.5 |
| large subunit of terminal oxygenase component of anthranilate 1,2-dioxygenase | ALO41_00184 | O85673 | Positive | 2552031 - 2553434 | 52978.3 |
| benzoate 1,2-dioxygenase beta subunit | ALO41_00185 | O85674 | Positive | 2553437 - 2553946 | 19727.2 |
| benzoate dioxygenase, ferredoxin reductase component | ALO41_00186 | O85675 | Positive | 2553962 - 2554984 | 37154.9 |
| muconate cycloisomerase | ALO41_00187 | P08310 | Positive | 2555042 - 2556163 | 40132.6 |
| muconolactone delta-isomerase | ALO41_00188 | P00948 | Positive | 2556129 - 2556494 | 13922.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








