Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO41_100488 | Not Available | Negative | 149721 - 150575 | 31214.6 |
| syringolide biosynthetic protein avrd1 | ALO41_00600 | Not Available | Negative | 151614 - 152549 | 34474.2 |
| stability/partitioning determinant | ALO41_101239 | Q52563 | Negative | 152824 - 153456 | 23189.1 |
| ribonuclease vapc | ALO41_00601 | Q52562 | Negative | 153497 - 153916 | 15139.3 |
| hypothetical protein | ALO41_100602 | Not Available | Positive | 154694 - 155029 | 11978.8 |
| type iii effector hopao1 | ALO41_04676 | Q79LY0 | Negative | 155355 - 156905 | 56886.7 |
| uncharacterized protein | ALO41_05330 | Not Available | Negative | 158949 - 159140 | 7006.72 |
| endonuclease/exonuclease/phosphatase | ALO41_03047 | Not Available | Negative | 159279 - 159746 | 17592.3 |
| uncharacterized protein | ALO41_03048 | Not Available | Negative | 159780 - 160442 | 24757.3 |
| putative periplasmic ligand-binding sensor protein | ALO41_102395 | Q89AS2 | Positive | 160634 - 161344 | 24452.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








