Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline sulfatase | ALO41_03387 | O69787 | Positive | 2505509 - 2507014 | 56994.0 |
| glycine betaine family abc transporter substrate-binding protein | ALO41_03388 | Q9L4K3 | Positive | 2507052 - 2507978 | 33018.7 |
| sulfate transporter family protein | ALO41_100019 | Q58DD2 | Positive | 2508123 - 2509691 | 56551.4 |
| shikimate dehydrogenase | ALO41_03389 | A4XNB9 | Negative | 2509800 - 2510624 | 29431.1 |
| oxygen-dependent coproporphyrinogen-iii oxidase | ALO41_03390 | Q48QH6 | Negative | 2510624 - 2511538 | 34558.3 |
| quinone oxidoreductase | ALO41_03391 | Not Available | Positive | 2511710 - 2512687 | 34333.1 |
| threonylcarbamoyl-amp synthase | ALO41_03392 | Q48QH8 | Negative | 2512695 - 2513252 | 20537.7 |
| rossmann fold nucleotide-binding protein smf | ALO41_03393 | P30852 | Negative | 2513291 - 2514352 | 36891.4 |
| lysm domain protein | ALO41_03394 | Not Available | Negative | 2514532 - 2515449 | 33125.7 |
| peptide deformylase | ALO41_03395 | Q88B43 | Positive | 2515575 - 2516081 | 19258.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








