Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna large subunit methyltransferase a | ALO41_05299 | P36999 | Negative | 2465231 - 2466043 | 30233.2 |
| succinyl-diaminopimelate desuccinylase | ALO41_03088 | Q48F49 | Negative | 2466040 - 2467191 | 41004.6 |
| glycosyl transferase family protein | ALO41_03089 | O13990 | Negative | 2467584 - 2469551 | 74265.1 |
| type iii effector hopau1 | ALO41_05233 | Not Available | Positive | 2470017 - 2472455 | 87621.8 |
| isehe3 orfa | ALO41_05234 | Not Available | Negative | 2472341 - 2472628 | 10996.4 |
| argininosuccinate lyase | ALO41_05394 | Q48QD3 | Negative | 2472899 - 2474314 | 52504.8 |
| sensor histidine kinase fims | ALO41_03358 | P94586 | Positive | 2474427 - 2475509 | 40105.5 |
| alginate biosynthesis regulatory protein algr | ALO41_03359 | P26275 | Positive | 2475506 - 2476252 | 27881.9 |
| hypothetical protein | ALO41_101858 | Not Available | Negative | 2476290 - 2476412 | 4365.22 |
| porphobilinogen deaminase | ALO41_03360 | Q500N6 | Positive | 2476485 - 2477426 | 33409.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








