Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain family protein | ALO41_04079 | P72192 | Negative | 2403728 - 2403940 | 7693.04 |
| aminomethyltransferase | ALO41_04080 | Q54DD3 | Negative | 2404353 - 2405528 | 42091.1 |
| glycine dehydrogenase | ALO41_04081 | Q48ME3 | Negative | 2405569 - 2408433 | 103546.0 |
| glycine cleavage system h protein | ALO41_04082 | Q887L4 | Negative | 2408444 - 2408827 | 13890.1 |
| hypothetical protein | ALO41_05556 | Not Available | Negative | 2408940 - 2409059 | 4407.64 |
| outer membrane efflux protein superfamily | ALO41_04083 | Not Available | Negative | 2409150 - 2409815 | 24045.3 |
| sensory box protein/response regulator | ALO41_04084 | Q9HYT3 | Negative | 2410096 - 2411601 | 55505.4 |
| sensory box protein/response regulator | ALO41_04085 | Q9A5I5 | Negative | 2411617 - 2412213 | 22148.8 |
| sensory box histidine kinase | ALO41_04086 | A6X580 | Negative | 2412223 - 2412612 | 14169.6 |
| two-component sensor/regulator | ALO41_04087 | Q9KHI5 | Negative | 2412597 - 2414336 | 64207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








