Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase, subunit alpha family protein | ALO41_00702 | O87386 | Positive | 2191924 - 2194830 | 105836.0 |
| sarcosine oxidase, subunit gamma family protein | ALO41_00703 | Not Available | Positive | 2194834 - 2195406 | 20755.7 |
| methyl-accepting chemotaxis protein | ALO41_00704 | Not Available | Positive | 2195621 - 2197561 | 69818.6 |
| transcriptional regulator, lysr family | ALO41_04704 | Not Available | Negative | 2197666 - 2198610 | 34186.5 |
| metallo-beta-lactamase family protein | ALO41_04703 | Not Available | Positive | 2198584 - 2199540 | 34549.0 |
| uncharacterized protein | ALO41_00706 | Not Available | Positive | 2199662 - 2200060 | 14943.3 |
| gnat family acetyltransferase | ALO41_00707 | Q7PCJ8 | Positive | 2200122 - 2200607 | 17967.2 |
| hypothetical protein | ALO41_00708 | Not Available | Negative | 2200679 - 2200804 | 4622.37 |
| chew domain-containing protein | ALO41_00709 | Not Available | Negative | 2200860 - 2202347 | 53309.6 |
| methyl-accepting chemotaxis transducer/sensory box protein | ALO41_04705 | Not Available | Negative | 2202344 - 2204500 | 81238.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








