Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | ALO41_02924 | O66550 | Negative | 2096174 - 2096698 | 19219.4 |
| dihydroneopterin aldolase | ALO41_02925 | P0AC17 | Negative | 2096689 - 2097042 | 13007.5 |
| glycerol-3-phosphate acyltransferase | ALO41_02926 | Q48NU7 | Positive | 2097117 - 2097686 | 20290.5 |
| trna n6-adenosine threonylcarbamoyltransferase | ALO41_100190 | Q48NU8 | Negative | 2097722 - 2098771 | 37354.1 |
| 30s ribosomal protein s21 | ALO41_02927 | Q48NU9 | Positive | 2098946 - 2099161 | 8386.25 |
| dna primase | ALO41_02928 | P0A118 | Positive | 2099651 - 2101624 | 73607.2 |
| rna polymerase sigma factor rpod | ALO41_02929 | P52326 | Positive | 2101692 - 2103542 | 69506.0 |
| sensory box/ggdef domain/eal domain-containing protein | ALO41_05247 | Not Available | Positive | 2103748 - 2106297 | 93970.3 |
| phage integrase | ALO41_02931 | Not Available | Positive | 2106499 - 2106897 | 14901.9 |
| hypothetical protein | ALO41_102623 | Not Available | Positive | 2106894 - 2107331 | 15223.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








