Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Prophage repressor | ALO41_01992 | Not Available | Positive | 1851603 - 1852358 | 28113.6 |
| Conserved hypothetical protein | ALO41_01993 | Not Available | Positive | 1852487 - 1852873 | 13286.3 |
| Regulatory protein | ALO41_01994 | Q83CQ8 | Positive | 1852951 - 1853148 | 7031.53 |
| uncharacterized protein | ALO41_01995 | Not Available | Positive | 1853135 - 1853365 | 8409.09 |
| Putative integrase | ALO41_101022 | P76056 | Positive | 1853455 - 1854586 | 42360.9 |
| site-specific recombinase, phage integrase family protein | ALO41_00520 | Not Available | Positive | 5271547 - 5273694 | 80459.8 |
| avrppig1 protein | ALO41_00521 | Q08678 | Negative | 5273863 - 5274951 | 40761.1 |
| Putative minor tail protein | ALO41_00522 | Not Available | Positive | 5275175 - 5275633 | 17041.8 |
| Putative baseplate assembly protein v | ALO41_00523 | Not Available | Positive | 5275608 - 5276168 | 19540.9 |
| hypothetical protein | ALO41_100884 | Not Available | Positive | 5276206 - 5276469 | 9282.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








