Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase, phage integrase family | ALO41_04963 | Q8VS06 | Negative | 2038603 - 2039622 | 38680.5 |
| putative toxin-antitoxin system antitoxin component, family | ALO41_100524 | Not Available | Positive | 2039567 - 2040256 | 25165.2 |
| oxidoreductase, zinc-binding protein | ALO41_04964 | Q3J6K9 | Negative | 2040262 - 2041413 | 40569.9 |
| tetr family transcriptional regulator | ALO41_01849 | Q3J6K8 | Negative | 2041296 - 2041883 | 21993.3 |
| 2-nitropropane dioxygenase family oxidoreductase | ALO41_01850 | Q49W60 | Positive | 2042074 - 2043153 | 38109.8 |
| molybdenum abc transporter, periplasmic molybdenum-binding protein | ALO41_01851 | Q9I2N2 | Positive | 2043255 - 2044022 | 27018.2 |
| molybdate abc transporter, permease protein | ALO41_01852 | P37731 | Positive | 2044023 - 2044703 | 23916.0 |
| molybdenum import atp-binding protein modc | ALO41_01853 | Q48J29 | Positive | 2044707 - 2045795 | 39786.4 |
| dna topoisomerase | ALO41_01854 | Q7T6X9 | Positive | 2045883 - 2046953 | 40148.4 |
| Trna-leu | Not Available | Not Available | Positive | 2047121 - 2047206 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








