Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin | ALO41_04958 | Not Available | Negative | 2012264 - 2013700 | 52426.7 |
| putative 3-hydroxyphenylpropionic transporter mhpt | ALO41_100465 | P77589 | Positive | 2013787 - 2015133 | 46321.0 |
| uncharacterized protein | ALO41_04959 | Not Available | Negative | 2015503 - 2016531 | 37772.2 |
| 3-alpha-hydroxysteroid dehydrogenase | ALO41_01831 | P0DMP5 | Negative | 2016535 - 2017302 | 27686.2 |
| putative benzaldehyde dehydrogenase oxidoreductase protein | ALO41_04960 | K9UV87 | Negative | 2017389 - 2018969 | 55460.3 |
| helix-turn-helix, fis-type | ALO41_100905 | P06519 | Positive | 2019129 - 2020922 | 65725.9 |
| trehalose synthase | ALO41_04961 | Not Available | Negative | 2020919 - 2023012 | 76995.8 |
| uncharacterized protein | ALO41_01834 | Not Available | Negative | 2023141 - 2023662 | 19377.6 |
| transcriptional regulator, lysr family | ALO41_01835 | Not Available | Negative | 2023746 - 2024030 | 10281.4 |
| thij/pfpi family protein | ALO41_01836 | A0A0H2ZIC3 | Negative | 2024237 - 2024842 | 22304.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








