Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO41_03606 | Q9I745 | Positive | 1925174 - 1925656 | 18043.8 |
| type vi secretion atpase | ALO41_05429 | Q9I742 | Positive | 1930178 - 1930885 | 26068.5 |
| tn3 family transposase | ALO41_05506 | P13694 | Negative | 1930886 - 1931052 | 6218.63 |
| hypothetical protein | ALO41_102659 | Not Available | Positive | 1931099 - 1931236 | 5055.24 |
| rlga | ALO41_100644 | P55559 | Positive | 1931306 - 1931911 | 22462.0 |
| integrase | ALO41_03897 | Not Available | Positive | 1931895 - 1933553 | 63344.8 |
| exea-like protein | ALO41_03898 | Not Available | Positive | 1933543 - 1934514 | 36382.2 |
| unknown protein sequence | ALO41_03577 | Not Available | Positive | 1936413 - 1936583 | 5951.46 |
| uncharacterized protein | ALO41_03578 | P43999 | Negative | 1936631 - 1937176 | 20761.2 |
| uncharacterized protein | ALO41_03579 | Not Available | Positive | 1937296 - 1938294 | 36452.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








